關於「featureCounts」標籤，搜尋引擎有相關的訊息討論：

Charlotte Soneson on Twitter: "@nickschurch @edueyras ...。

@nickschurch @edueyras @markrobinsonca >99% mapping rate with STAR for sim2 data, >95% assigned to features w featureCounts. 5:49 AM - 11 Jan 2016.。

Union Exon Based Approach for RNA-Seq Gene Quantification - NCBI。

2015年11月11日 · Such ambiguous reads are ignored by featureCounts but counted in RSEM. ... Wang K, Singh D, Zeng Z, Coleman SJ, Huang Y, Savich GL et al.： tw | tw。

Integrative RNA-Seq and H3 Trimethylation ChIP-Seq Analysis - NCBI。

2021年4月5日 · Raw counts were generated using featureCounts [14] (version 2.0.0) ... Carboni G.L., Gao B., Nishizaki M., Xu K., Minna J.D., Roth J.A., ...： tw | tw。

Factorial study of the RNA-seq computational workflow identifies ...。

2.1, featureCounts (30) (Subread v1.6.4) and HTSeq (31) v.0.11.2. Quantification was summarized as gene-level counts. Ensembl (32) ...： tw | tw。

Gene expression units explained: RPM, RPKM, FPKM, TPM。

2021年4月4日 · ... gene length must be in bp nm = norm() nm.rpkm(df=df, 'length') # get RPKM ... which can be obtained from RSEM, featureCounts or HTSeq ...。

[PDF] Single-Cell Transcriptome Profiling Simulation Reveals the Impact of ...。

2021年7月19日 · Correspondence: [email protected] (G.L.); [email protected] (L.L.). Abstract: Despite the scRNA-seq ... The featureCounts software.。

Differentially-Expressed miRNAs in Ectopic Stromal Cells Contribute ...。

2018年11月28日 · ... using featureCounts v1.5.2 (bioinf.wehi.edu.au/featureCounts/) that ... P.; Papadopoulos, G.L.; Reczko, M.; Dalamagas, T.; Giannopoulos, ...： tw | tw。

Evaluation and comparison of computational tools for RNA-seq ...。

2017年8月7日 · Alternative promoter usage results in either a full-length (FL) or a ... Liao Y, Smyth GK, Shi W. featureCounts: an efficient general ...： tw | tw。

[PDF] Assembly and Analysis of Next-Generation Sequencing Data。

formed using software tools like featureCounts[131] or HTSeq[9], ... GL is the length of the respective gene. b) Distribution of the fraction of.。

(PDF) RNA-Seq workflow: Gene-level exploratory analysis and ...。

2015年10月14日 · featureCounts Rsubread R/Bioc. matrix DESeqDataSetFromMatrix ... demonstrate the construction of the DESeqDataSet from two starting points:.